Signal Peptide Website
Search my Protein
Advanced Search
Database Search
References
Hints
Links
Imprint
Signal Peptide Database - Viruses
Entry Details
ID
2418
Source Database
UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot Accession Number
Q80A30 (Created: 2007-11-13 Updated: 2008-11-25)
UniProtKB/Swiss-Prot Entry Name
HEMA_I01A1
Protein Name
Hemagglutinin
Gene
HA
Organism Scientific
Influenza A virus (strain A/Chicken/Hong Kong/YU562/2001 H5N1 genotype B)
Organism Common
Lineage
Viruses
ssRNA negative-strand viruses
Orthomyxoviridae
Influenzavirus A
Protein Length [aa]
552
Protein Mass [Da]
62439
Features
Type
Description
Status
Start
End
signal peptide
1
5
chain
Hemagglutinin HA1 chain
6
327
chain
Hemagglutinin HA2 chain
336
552
disulfide bond
Interchain (between HA1 and HA2 chains)
by similarity
9
472
disulfide bond
by similarity
47
279
disulfide bond
by similarity
60
72
disulfide bond
by similarity
95
140
disulfide bond
by similarity
283
307
disulfide bond
by similarity
479
483
transmembrane region
potential
521
541
topological domain
Extracellular
potential
6
520
topological domain
Cytoplasmic
potential
542
552
glycosylation site
N-linked (GlcNAc...)
potential
15
15
glycosylation site
N-linked (GlcNAc...)
potential
16
16
glycosylation site
N-linked (GlcNAc...)
potential
28
28
glycosylation site
N-linked (GlcNAc...)
potential
170
170
glycosylation site
N-linked (GlcNAc...)
potential
291
291
glycosylation site
N-linked (GlcNAc...)
potential
489
489
site
Cleavage; by host
by similarity
335
336
propeptide
Connecting peptide
328
335
lipid moiety-binding region
S-palmitoyl cysteine; by host
by similarity
546
546
non-terminal residue
1
1
non-terminal residue
552
552
SP Length
5
----+----1----+----2----+----3----+----4----+----5
Signal Peptide
SLVKS
Sequence
S
LVKS
DQICIGYHA
N
N
STEQVDTIMEK
N
VTVTHAQDILEKTHNGKLCDLD
GVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPANDLCYPGDF
NDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFR
NVVWLIKKNSAYPTIKRSY
N
NTNQEDLLVLWGIHHPNDAAEQTKLYQNPT
TYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNG
NFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAI
N
SSMPFHNIH
PLTIGECPKYVKSNRLVLATGLRNTPQ
RERRRKKR
G
LFGAIAGFIEGGWQ
GMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEA
VGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNV
KNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVK
N
GTYDYPQYSEE
ARLNREEISGVKLESMGTYQ
ILSIYSTVASSLTLAIMVAGL
SLWM
C
SNGS
L
Q
Original
SLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLD
GVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPANDLCYPGDF
NDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFR
NVVWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPT
TYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNG
NFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIH
PLTIGECPKYVKSNRLVLATGLRNTPQRERRRKKRGLFGAIAGFIEGGWQ
GMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEA
VGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNV
KNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPQYSEE
ARLNREEISGVKLESMGTYQILSIYSTVASSLTLAIMVAGLSLWMCSNGS
LQ
----+----1----+----2----+----3----+----4----+----5
Hydropathies
Home
Imprint
© 2007-2017
Dr. Katja Kapp
, Kassel &
thpr.net e. K.
, Dresden, Germany, last update 2010-06-11