Signal Peptide Database

Signal Peptide Database - Viruses

Entry Details

805

Source Database

UniProtKB/Swiss-Prot

UniProtKB/Swiss-Prot Accession Number

Q8JSP8 (Created: 2007-04-17 Updated: 2008-11-25)

UniProtKB/Swiss-Prot Entry Name

SPIKE_CVPIA

Protein Name

Spike glycoprotein

Gene

Organism Scientific

Porcine hemagglutinating encephalomyelitis virus (strain IAF-404)

Organism Common

HEV

Lineage

Viruses
  ssRNA positive-strand viruses, no DNA stage
    Nidovirales
      Coronaviridae
        Coronavirus
          Coronavirus group 2
            Coronavirus group 2a

Protein Length [aa]

1349

Protein Mass [Da]

149649

Features

TypeDescriptionStatusStartEnd
signal peptide      potential   1   17
chain   Spike glycoprotein   by similarity   18   1349
chain   Spike protein S1   by similarity   18   754
chain   Spike protein S2   by similarity   755   1349
transmembrane region      potential   1298   1314
topological domain   Extracellular   potential   18   1297
topological domain   Cytoplasmic   potential   1315   1349
region of interest   Heptad repeat 1   potential   1029   1072
region of interest   Heptad repeat 2   potential   1253   1283
glycosylation site   N-linked (GlcNAc...)   potential   59   59
glycosylation site   N-linked (GlcNAc...)   potential   133   133
glycosylation site   N-linked (GlcNAc...)   potential   198   198
glycosylation site   N-linked (GlcNAc...)   potential   437   437
glycosylation site   N-linked (GlcNAc...)   potential   456   456
glycosylation site   N-linked (GlcNAc...)   potential   635   635
glycosylation site   N-linked (GlcNAc...)   potential   662   662
glycosylation site   N-linked (GlcNAc...)   potential   682   682
glycosylation site   N-linked (GlcNAc...)   potential   700   700
glycosylation site   N-linked (GlcNAc...)   potential   725   725
glycosylation site   N-linked (GlcNAc...)   potential   774   774
glycosylation site   N-linked (GlcNAc...)   potential   923   923
glycosylation site   N-linked (GlcNAc...)   potential   1180   1180
glycosylation site   N-linked (GlcNAc...)   potential   1210   1210
glycosylation site   N-linked (GlcNAc...)   potential   1220   1220
glycosylation site   N-linked (GlcNAc...)   potential   1239   1239
glycosylation site   N-linked (GlcNAc...)   potential   1253   1253
glycosylation site   N-linked (GlcNAc...)   potential   1274   1274
site   Cleavage; by host   by similarity   754   755
compositionally biased region   Cys-rich      1315   1332
coiled-coil region      potential   1029   1073
coiled-coil region      potential   1255   1283

SP Length

----+----1----+----2----+----3----+----4----+----5

Signal Peptide

MFFILLITLPSVFAVIG

Sequence

MFFILLITLPSVFAVIGDLKCNTSSINDVDTGVPSISSEVVDVTNGLGTF
YVLDRVYLNTTLLLNGYYPISGATFRNVALKGTRLLSTLWFKPPFLSPFN
DGIFAKVKNSRFSKHGVIYSEFPAITIGSTFVNTSYSIVVKPHTSFINGN
LQGFLQISVCQYTMCEYPQTICHPNLGNQRIELWHHDTDVVSCLYRRNFT
YDVNADYLYFHFYQEGGTFYAYFTDTGFVTKFLFKLYLGTVLSHYYVMPL
TCDSALSLEYWVTPLTTRQFLLAFDQDGVLYHAVDCASDFMSEIMCKTSS
ITPPTGVYELNGYTVQPVATVYRRIPDLPNCDIEAWLNSKTVSSPLNWER
KIFSNCNFNMGRLMSFIQADSFGCNNIDASRLYGMCFGSITIDKFAIPNS
RKVDLQVGKSGYLQSFNYKIDTAVSSCQLYYSLPAANVSVTHYNPSSWNR
RYGFINQSFGSRGLHDAVYSQQCFNTPNTYCPCRTSQCIGGAGTGTCPVG
TTVRKCFAAVTNATKCTCWCQPDPSTYKGVNAWTCPQSKVSIQPGQHCPG
LGLVEDDCSGNPCTCKPQAFIGWSSETCLQNGRCNIFANFILNDVNSGTT
CSTDLQQGNTNITTDVCVNYDLYGITGQGILIEVNATYYNSWQNLLYDSS
GNLYGFRDYLSNRTFLIRSCYSGRVSAVFHANSSEPALMFRNLKCSHVFN
YTILRQIQLVNYFDSYLGCVVNAYNNTASAVSTCDLTVGSGYCVDYVTAL
RSRRSFTTGYRFTNFEPFAANLVNDSIEPVGGLYEIQIPSEFTIGNLEEF
IQTSSPKVTIDCATFVCGDYAACRQQLAEYGSFCENINAILIEVNELLDT
TQLQVANSLMNGVTLSTKIKDGINFNVDDINFSSVLGCLGSECNRASTRS
AIEDLLFDKVKLSDVGFVQAYNNCTGGAEIRDLICVQSYNGIKVLPPLLS
ENQISGYTSAATAASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQ
KLIASAFNNALDSIQEGFDATNSALVKIQAVVNANAEALNNLLQQLSNRF
GAISASLQEILSRLDALEAKAQIDRLINGRLTALNAYVSQQLSDSTLVKF
SAAQAIEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFSYVPT
KYVTAKVSPGLCIAGDIGISPKSGYFINVNNSWMFTGSGYYYPEPITQNN
VVVMSTCAVNYTKAPDLMLNTSTPNLPDFKEELYQWFKNQSSLAPDLSFD
YINVTFLDLQDEMNRLQEAIKVLNHSYINLKDIGTYEYYVKWPWYVWLLI
CLAGVVMLVLLFFICCCTGCGTSCFKKCGGCFDDYTGHQEFVIKTSHDD

Original

----+----1----+----2----+----3----+----4----+----5

Hydropathies

Signal Peptide Website